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Aliases : LUX, PCL1
Description : not classified & original description: none
Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00186590 | ARR11,... | RNA biosynthesis.transcriptional activation.ARR-B... | 0.01 | OrthoFinder output from all 47 species | |
| AMTR_s00057p00108840 | ARR1, RR1,... | RNA biosynthesis.transcriptional activation.ARR-B... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00101p00128190 | evm_27.TU.AmTr_v1... | Transcription factor LUX OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT2G40970 | MYBC1 | Homeodomain-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT5G49240 | APRR4, PRR4 | pseudo-response regulator 4 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g048194 | ARR11 | subgroup ARR-B transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g08573 | ARR11 | subgroup ARR-B transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g34149 | No alias | component *(LUX) of circadian clock Evening complex (EC)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g42522 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g58078 | MYBC1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene00999.t1 | RR2, ARR2,... | subgroup ARR-B transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene69302.t1 | LUX, PCL1,... | component *(LUX) of circadian clock Evening complex (EC)... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g16091 | RR12, ARR12 | subgroup ARR-B transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.16G029800.1 | ARR11, Ceric.16G029800 | subgroup ARR-B transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.17G049600.1 | LUX, PCL1,... | component *(LUX) of circadian clock Evening complex (EC)... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z080900.1 | MYBC1, Ceric.1Z080900 | not classified & original description: pacid=50607904... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G035500.1 | RR12, ARR12,... | subgroup ARR-B transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G008400.1 | Ceric.31G008400 | subgroup ARR-B transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cre02.g083750 | LUX, PCL1 | Transcription factor BOA OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g06277 | LUX, PCL1 | component *(LUX) of circadian clock Evening complex (EC)... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g47938 | ARR1, RR1 | subgroup ARR-B transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g05377 | RR12, ARR12 | subgroup ARR-B transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g10192 | RR12, ARR12 | subgroup ARR-B transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g00840 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g13817 | No alias | component *(LUX) of circadian clock Evening complex (EC)... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g20630 | ARR1, RR1 | subgroup ARR-B transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g26693 | ARR1, RR1 | subgroup ARR-B transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01007550001 | ARR11 | RNA biosynthesis.transcriptional activation.ARR-B... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01025785001 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01029177001 | ARR10, RR10 | RNA biosynthesis.transcriptional activation.ARR-B... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_15883 | ARR10, RR10 | B-type cytokinin ARR response activator. transcription... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g67770.1 | ARR11, LOC_Os01g67770 | B-type cytokinin ARR response activator. transcription... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g34110.1 | LOC_Os05g34110 | Transcription factor MYBC1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g43910.1 | RR18, ARR18,... | B-type cytokinin ARR response activator. transcription... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g05541 | ARR1, RR1 | subgroup ARR-B transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06674 | ARR1, RR1 | subgroup ARR-B transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g22323 | LUX, PCL1 | component *(LUX) of circadian clock Evening complex (EC)... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g26067 | ARR11 | subgroup ARR-B transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g28555 | ARR1, RR1 | subgroup ARR-B transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g20600.1 | ARR1, RR1 | B-type cytokinin ARR response activator. transcription... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g15114 | MYBC1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g21083 | ARR11 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g26540 | ARR11 | subgroup ARR-B transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g08589 | RR12, ARR12 | subgroup ARR-B transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g08264 | LUX, PCL1 | component *(LUX) of circadian clock Evening complex (EC)... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g20473 | LUX, PCL1 | component *(LUX) of circadian clock Evening complex (EC)... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g20141 | RR12, ARR12 | subgroup ARR-B transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g66612 | ARR1, RR1 | subgroup ARR-B transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g19713 | ARR1, RR1 | subgroup ARR-B transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g23834 | ARR10, RR10 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g02280 | ARR11 | subgroup ARR-B transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05145 | LUX, PCL1 | component *(LUX) of circadian clock Evening complex (EC)... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g05219 | RR12, ARR12 | subgroup ARR-B transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g05741 | No alias | component *(LUX) of circadian clock Evening complex (EC)... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0037.g011863 | MYBC1 | not classified & original description: CDS=1-1491 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0041.g012479 | LUX, PCL1 | component *(LUX) of circadian clock Evening complex (EC)... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g065540.3.1 | ARR1, RR1, Solyc01g065540 | B-type cytokinin ARR response activator. transcription... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g008050.4.1 | ARR1, RR1, Solyc04g008050 | B-type cytokinin ARR response activator. transcription... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g005140.4.1 | RR12, ARR12,... | B-type cytokinin ARR response activator. transcription... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g078310.2.1 | Solyc10g078310 | Transcription factor MYBC1 OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc10g080960.1.1 | Solyc10g080960 | Transcription factor MYBC1 OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g18223 | ARR11 | subgroup ARR-B transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g19044 | ARR1, RR1 | subgroup ARR-B transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g51591 | ARR10, RR10 | subgroup ARR-B transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g05145 | LUX, PCL1 | component *(LUX) of circadian clock Evening complex (EC)... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e018927_P001 | ARR11, Zm00001e018927 | B-type cytokinin ARR response activator. transcription... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e028539_P002 | ARR11, Zm00001e028539 | B-type cytokinin ARR response activator. transcription... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
| MF | GO:0016759 | cellulose synthase activity | IEP | HCCA |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | HCCA |
| BP | GO:0030243 | cellulose metabolic process | IEP | HCCA |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | HCCA |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001005 | SANT/Myb | 163 | 211 |
| No external refs found! |