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  5. Adi_g005295

Adi_g005295 (PSB29, THF1)


Aliases : PSB29, THF1

Description : regulatory protein *(THF1) of thylakoid biogenesis & original description: none


Gene families : OG0005582 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005582_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g005295
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
AT2G20890 PSB29, THF1 photosystem II reaction center PSB29 protein 0.02 OrthoFinder output from all 47 species
Aspi01Gene25676.t1 PSB29, THF1,... regulatory protein *(THF1) of thylakoid bioGenesis &... 0.03 OrthoFinder output from all 47 species
Azfi_s0018.g014961 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Dde_g05773 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Len_g11640 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Lfl_g00738 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Zm00001e035236_P001 PSB29, THF1,... Psb29 protein involved in PS-II assembly 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0010207 photosystem II assembly IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR017499 Thf1 3 195
No external refs found!