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  5. Adi_g003792

Adi_g003792


Description : not classified & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g003792

Target Alias Description ECC score Gene Family Method Actions
Adi_g008105 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088761 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0125.g048560 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Cba_g24805 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dcu_g05540 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
GSVIVT01008897001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Lfl_g11310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_44557g0010 CIP8 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g23014 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12414 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g009000.3.1 RHC1A, Solyc01g009000 Probable E3 ubiquitin-protein ligase RHC1A... 0.03 OrthoFinder output from all 47 species
Spa_g05878 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 69 111
No external refs found!