Adi_g003776


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g003776

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00032470 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00113430 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g18485... 0.02 OrthoFinder output from all 47 species
AT3G24000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g002817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018038 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020425 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g048224 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g055654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g072273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26153 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36026 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g25950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g63229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01906.t1 Aspi01Gene01906 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10286.t1 Aspi01Gene10286 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10966.t1 Aspi01Gene10966 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14575.t2 CRR22, Aspi01Gene14575 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14876.t1 OTP80, Aspi01Gene14876 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010932 REME1 not classified & original description: CDS=1-1479 0.03 OrthoFinder output from all 47 species
Azfi_s0029.g024142 No alias not classified & original description: CDS=203-3646 0.03 OrthoFinder output from all 47 species
Azfi_s0117.g046569 No alias not classified & original description: CDS=1-2520 0.02 OrthoFinder output from all 47 species
Ceric.20G007900.1 Ceric.20G007900 not classified & original description: pacid=50566810... 0.03 OrthoFinder output from all 47 species
Dac_g18430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23389 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03570 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19510 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01021576001 BRCA1, ATBRCA1 DNA damage response.BRCA1–BARD1 DNA-damage response... 0.03 OrthoFinder output from all 47 species
LOC_Os03g08680.1 LOC_Os03g08680 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
Len_g17356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18973 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24399 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g25823 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03121 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17695 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g17745 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28789 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34019 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41121 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13547 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65497 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53593 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009122 No alias not classified & original description: CDS=1-1917 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010161 No alias not classified & original description: CDS=1-2802 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022201 No alias not classified & original description: CDS=265-2808 0.02 OrthoFinder output from all 47 species
Sam_g03385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25324 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g46501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g52092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo92008 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
Solyc02g069500.1.1 Solyc02g069500 Pentatricopeptide repeat-containing protein At4g21300... 0.02 OrthoFinder output from all 47 species
Solyc10g005090.3.1 Solyc10g005090 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Spa_g10971 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13637 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10948 MEF22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004929_P001 Zm00001e004929 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 72 118
IPR002885 Pentatricopeptide_repeat 173 219
IPR002885 Pentatricopeptide_repeat 274 321
IPR002885 Pentatricopeptide_repeat 45 67
IPR002885 Pentatricopeptide_repeat 147 169
No external refs found!