Ehy_g07885

Description : platform ATPase CDC48 & original description: none

Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ehy_g07885

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00049p00071550	emb1354, CDC48C,...	Cell division control protein 48 homolog C...	0.03	OrthoFinder output from all 47 species
AT3G01610	emb1354, CDC48C	cell division cycle 48C	0.03	OrthoFinder output from all 47 species
AT3G53230	No alias	ATPase, AAA-type, CDC48 protein	0.03	OrthoFinder output from all 47 species
Aev_g04868	emb1354, CDC48C	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g21367	CDC48B	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g33182	emb1354, CDC48C	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g02580	CDC48B	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g04257	No alias	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g10573	No alias	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g22418	No alias	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g77518	No alias	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.16G061700.1	emb1354, CDC48C,...	platform ATPase CDC48 & original description:...	0.03	OrthoFinder output from all 47 species
Cre09.g398550	emb1354, CDC48C	Cell division control protein 48 homolog C...	0.02	OrthoFinder output from all 47 species
Dac_g09762	emb1354, CDC48C	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Len_g28733	CIP111	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g15410	emb1354, CDC48C	platform ATPase CDC48 & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g20925	CIP111	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g19173	emb1354, CDC48C	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g40907	CDC48B	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g01985	No alias	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g52066	CDC48B	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g13016	CIP111	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g08291	emb1354, CDC48C	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g55150	No alias	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003605	CDC48B	not classified & original description: CDS=1-351	0.04	OrthoFinder output from all 47 species
Solyc06g074980.3.1	Solyc06g074980	platform ATPase (CDC48)	0.04	OrthoFinder output from all 47 species
Tin_g13043	CDC48B	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e025331_P002	emb1354, CDC48C,...	Cell division control protein 48 homolog C...	0.03	OrthoFinder output from all 47 species
Zm00001e036688_P001	emb1354, CDC48C,...	Cell division control protein 48 homolog C...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0031369	translation initiation factor binding	IEP	HCCA
BP	GO:0032324	molybdopterin cofactor biosynthetic process	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0043545	molybdopterin cofactor metabolic process	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0051189	prosthetic group metabolic process	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041569	AAA_lid_3	403	445
IPR041569	AAA_lid_3	679	718
IPR003959	ATPase_AAA_core	251	380
IPR003959	ATPase_AAA_core	524	657
IPR004201	Cdc48_dom2	138	198
IPR003338	CDC4_N-term_subdom	36	117

External Links

No external refs found!

Ehy_g07885

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation