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  5. Adi_g000508

Adi_g000508 (ATGCN1, GCN1)


Aliases : ATGCN1, GCN1

Description : not classified & original description: none


Gene families : OG0003164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003164_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g000508

Target Alias Description ECC score Gene Family Method Actions
Aev_g31359 ATGCN1, GCN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g00956 ATGCN1, GCN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G026600.1 ATGCN1, GCN1,... not classified & original description: pacid=50600930... 0.02 OrthoFinder output from all 47 species
Cre11.g467781 ATGCN1, GCN1 ABC transporter F family member 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g04794 ATGCN1, GCN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01954 ATGCN1, GCN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04312 ATGCN1, GCN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07883 ATGCN1, GCN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e039565_P001 ATGCN1, GCN1,... ABC transporter F family member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR032781 ABC_tran_Xtn 1 35
IPR003439 ABC_transporter-like_ATP-bd 76 206
No external refs found!