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  5. Sacu_v1.1_s3296.g028710

Sacu_v1.1_s3296.g028710


Description : uridine 5-carboxymethylaminomethyl modification enzyme *(TrmE) & original description: CDS=1-828


Gene families : OG0006066 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s3296.g028710


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000930 gamma-tubulin complex IEP HCCA
CC GO:0000931 gamma-tubulin ring complex IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0031503 protein-containing complex localization IEP HCCA
BP GO:0033566 gamma-tubulin complex localization IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018948 GTP-bd_TrmE_N 65 182
IPR025867 MnmE_helical 185 276
No external refs found!