Sacu_v1.1_s1086.g027942

Description : not classified & original description: CDS=176-2989

Gene families : OG0001451 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001451_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s1086.g027942

Target	Alias	Description	ECC score	Gene Family Method
AT5G46070	No alias	Guanylate-binding family protein	0.04	OrthoFinder output from all 47 species
Adi_g109267	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.33G001500.1	Ceric.33G001500	not classified & original description: pacid=50606915...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000955.23	No alias	No description available	0.01	OrthoFinder output from all 47 species
Cre08.g384200	No alias	No description available	0.02	OrthoFinder output from all 47 species
GSVIVT01021121001	No alias	No description available	0.03	OrthoFinder output from all 47 species
GSVIVT01021122001	No alias	No description available	0.04	OrthoFinder output from all 47 species
Pir_g12234	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g12052	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g077600.3.1	Solyc02g077600	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Tin_g02161	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000120	RNA polymerase I transcription regulator complex	IEP	HCCA
CC	GO:0005667	transcription regulator complex	IEP	HCCA
BP	GO:0006360	transcription by RNA polymerase I	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016832	aldehyde-lyase activity	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR015894	Guanylate-bd_N	80	242
IPR003191	Guanylate-bd/ATL_C	247	556

External Links

No external refs found!