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  5. Sacu_v1.1_s0929.g027841

Sacu_v1.1_s0929.g027841 (NPC1)


Aliases : NPC1

Description : EC_3.1 hydrolase acting on ester bond & original description: CDS=3193-3999


Gene families : OG0000759 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000759_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0929.g027841
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Adi_g077055 NPC1 phospholipase-C *(nPLC)) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05009 NPC1 phospholipase-C *(nPLC)) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene64666.t1 NPC1, Aspi01Gene64666 phospholipase-C *(nPLC)) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g39021 NPC1 phospholipase-C *(nPLC)) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g21107 NPC1 phospholipase-C *(nPLC)) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006394_P001 NPC4, Zm00001e006394 phospholipase C (nPLC) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0005384 manganese ion transmembrane transporter activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0030026 cellular manganese ion homeostasis IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0034227 tRNA thio-modification IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055071 manganese ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR007312 Phosphoesterase 1 244
IPR000326 P_Acid_Pase_2/haloperoxidase 26 108
No external refs found!