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  5. Sacu_v1.1_s0323.g027238

Sacu_v1.1_s0323.g027238 (LRL3)


Aliases : LRL3

Description : bHLH-type transcription factor & original description: CDS=1-1038


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0323.g027238

Target Alias Description ECC score Gene Family Method Actions
Adi_g115453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06340 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g55636 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01033350001 No alias External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
Mp1g19210.1 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Nbi_g18447 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23158 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51492 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000921_P005 Zm00001e000921 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Zm00001e005554_P001 Zm00001e005554 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Zm00001e012110_P003 Zm00001e012110 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
BP GO:0003333 amino acid transmembrane transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0070461 SAGA-type complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 200 245
No external refs found!