1. Home
  2. Species
  3. Equisetum hyemale
  4. Sequence
  5. Ehy_g07629

Ehy_g07629 (RBP-DR1, AtRBP-DR1)


Aliases : RBP-DR1, AtRBP-DR1

Description : not classified & original description: none


Gene families : OG0001208 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001208_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g07629
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Adi_g023113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28286 FCA transcription factor *(FCA/SSF) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17585 FCA transcription factor *(FCA/SSF) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28529 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G016000.1 Ceric.06G016000 not classified & original description: pacid=50619514... 0.03 OrthoFinder output from all 47 species
Ceric.19G065300.1 RBP-DR1,... not classified & original description: pacid=50575797... 0.03 OrthoFinder output from all 47 species
Cre03.g177200 FCA RNA-binding protein BRN1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g18569 FCA transcription factor *(FCA/SSF) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43236 FCA transcription factor *(FCA/SSF) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g31360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_05124 FCA no description available(sp|b8bcz8|fca_orysi : 224.0) 0.03 OrthoFinder output from all 47 species
Gb_06455 RBP-DR1, AtRBP-DR1 RNA-binding protein BRN1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g22611 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06188 FCA transcription factor *(FCA/SSF) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g06543 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02118 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g12927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13897 FCA transcription factor *(FCA/SSF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08240 FCA transcription factor *(FCA/SSF) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g074360.4.1 RBP-DR1,... RNA-binding protein BRN1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g56153 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10875 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009433_P002 FCA, Zm00001e009433 no description available(sp|b8bcz8|fca_orysi : 625.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 113 178
IPR000504 RRM_dom 309 379
IPR000504 RRM_dom 25 82
No external refs found!