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  5. Sacu_v1.1_s0249.g026730

Sacu_v1.1_s0249.g026730


Description : not classified & original description: CDS=1-762


Gene families : OG0000108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0249.g026730

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene14640.t1 Aspi01Gene14640 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19961.t1 Aspi01Gene19961 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34903.t1 Aspi01Gene34903 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35080.t1 Aspi01Gene35080 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44800.t1 Aspi01Gene44800 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene51960.t1 Aspi01Gene51960 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g28248 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g29151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!