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  5. Sacu_v1.1_s0240.g026619

Sacu_v1.1_s0240.g026619


Description : not classified & original description: CDS=1-2196


Gene families : OG0008651 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008651_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0240.g026619
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00129p00087850 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aev_g13465 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016672001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_32405 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g40210.1 LOC_Os11g40210 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_387881g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc03g123590.4.1 Solyc03g123590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g08005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005785 signal recognition particle receptor complex IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR005516 Remorin_C 619 715
No external refs found!