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  5. Sacu_v1.1_s0229.g026393

Sacu_v1.1_s0229.g026393


Description : not classified & original description: CDS=1-927


Gene families : OG0002298 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002298_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0229.g026393
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Aop_g05853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g00861 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_27020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g13649 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g14120 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g63006 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12163 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008252 nucleotidase activity IEP HCCA
MF GO:0008253 5'-nucleotidase activity IEP HCCA
BP GO:0009166 nucleotide catabolic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009264 deoxyribonucleotide catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!