Sacu_v1.1_s0226.g026341


Description : not classified & original description: CDS=731-1243


Gene families : OG0000034 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0226.g026341
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Ala_g38876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04141 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g62238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g64390 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g08094 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g10742 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g43233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g23922 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g01426 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g21001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53764 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g29806 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA

No InterPro domains available for this sequence

No external refs found!