1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0214.g025993

Sacu_v1.1_s0214.g025993 (ERF72, EBP, ATEBP, RAP2.3)


Aliases : ERF72, EBP, ATEBP, RAP2.3

Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity & original description: CDS=295-1326


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0214.g025993

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00053050 ABI4, SAN5,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 OrthoFinder output from all 47 species
Adi_g044380 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g30583 LEP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23568.t1 CRF3, Aspi01Gene23568 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G065100.1 DREB2A, DREB2,... subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000984.2 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre16.g661650 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g09720 CRF4 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08328 LEP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08401 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01013913001 ERF104 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01013917001 ERF104 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01013923001 ERF104 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
LOC_Os01g66270.1 LOC_Os01g66270 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g34730.1 LOC_Os05g34730 transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
LOC_Os08g35240.1 LOC_Os08g35240 Ethylene-responsive transcription factor ERF017... 0.02 OrthoFinder output from all 47 species
Lfl_g31233 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
MA_10433094g0010 ORA47 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_214532g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_27642g0010 PUCHI transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_5306433g0010 No alias Ethylene-responsive transcription factor ERF017... 0.02 OrthoFinder output from all 47 species
MA_9304g0020 ATERF-9, ERF9, ATERF9 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Mp5g11100.1 ATERF4, RAP2.5,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g13760.1 RAP2.4 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Pir_g05239 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Pnu_g13205 No alias subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26066 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c11_13860V3.1 ATERF-9, ERF9,... ethylene responsive element binding factor 4 0.01 OrthoFinder output from all 47 species
Solyc04g072900.1.1 RAP2.4, Solyc04g072900 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc05g052040.1.1 Solyc05g052040 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc12g056590.2.1 ERF110, Solyc12g056590 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Tin_g05634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30387 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e015314_P001 ERF5, ATERF-5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e023759_P001 Zm00001e023759 Ethylene-responsive transcription factor ERF017... 0.03 OrthoFinder output from all 47 species
Zm00001e031497_P001 ABI4, SAN5,... Ethylene-responsive transcription factor ABI4 OS=Oryza... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 93 142
No external refs found!