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  5. Sacu_v1.1_s0210.g025882

Sacu_v1.1_s0210.g025882 (ATADH, ATADH1, ADH1, ADH)


Aliases : ATADH, ATADH1, ADH1, ADH

Description : not classified & original description: CDS=387-1595


Gene families : OG0000282 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000282_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0210.g025882
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Aob_g36113 ATADH, ATADH1, ADH1, ADH not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01026505001 ATADH, ATADH1, ADH1, ADH Carbohydrate metabolism.fermentation.alcoholic... 0.03 OrthoFinder output from all 47 species
MA_10436519g0020 No alias Alcohol dehydrogenase OS=Malus domestica... 0.02 OrthoFinder output from all 47 species
Zm00001e005602_P006 ATADH, ATADH1,... alcohol dehydrogenase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006282 regulation of DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
InterPro domains Description Start Stop
IPR000477 RT_dom 19 105
IPR013149 ADH-like_C 231 355
IPR013154 ADH-like_N 61 188
No external refs found!