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  5. Sacu_v1.1_s0208.g025834

Sacu_v1.1_s0208.g025834 (UVR1, UVH3)


Aliases : UVR1, UVH3

Description : DNA repair endonuclease *(XPG) & original description: CDS=68-6733


Gene families : OG0004929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004929_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0208.g025834

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g10780.1 UVR1, UVH3,... DNA repair endonuclease (XPG) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR006085 XPG_DNA_repair_N 1 96
IPR032881 Oberon_PHD 1574 1692
IPR006086 XPG-I_dom 827 908
No external refs found!