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  5. Sacu_v1.1_s0205.g025710

Sacu_v1.1_s0205.g025710


Description : not classified & original description: CDS=20-496


Gene families : OG0009591 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009591_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0205.g025710
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Dcu_g38358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34059 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005785 signal recognition particle receptor complex IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA

No InterPro domains available for this sequence

No external refs found!