Sacu_v1.1_s0202.g025642


Description : not classified & original description: CDS=1-1872


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0202.g025642

Target Alias Description ECC score Gene Family Method Actions
Adi_g021711 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07187 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23511 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g19202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05068 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0084.g038899 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2004 0.04 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.01 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.01 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.01 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.01 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.01 OrthoFinder output from all 47 species
Cba_g05321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67208 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67250 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75394 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G002900.1 Ceric.09G002900 not classified & original description: pacid=50586532... 0.03 OrthoFinder output from all 47 species
Ceric.13G012100.1 VAC1, ECB2,... not classified & original description: pacid=50635600... 0.02 OrthoFinder output from all 47 species
Ceric.14G038700.1 Ceric.14G038700 ssDNA-binding protein *(OSB) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.18G038700.1 Ceric.18G038700 not classified & original description: pacid=50621594... 0.03 OrthoFinder output from all 47 species
Ceric.23G026100.1 Ceric.23G026100 not classified & original description: pacid=50611257... 0.02 OrthoFinder output from all 47 species
Ceric.25G039100.1 Ceric.25G039100 not classified & original description: pacid=50593222... 0.02 OrthoFinder output from all 47 species
Ceric.31G051800.1 Ceric.31G051800 not classified & original description: pacid=50574746... 0.03 OrthoFinder output from all 47 species
Ceric.36G038100.1 Ceric.36G038100 not classified & original description: pacid=50568680... 0.04 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.01 OrthoFinder output from all 47 species
Dac_g35455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02346 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14439 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26505 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g48582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g03925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g41462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56098 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g46161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000469 cleavage involved in rRNA processing IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004359 glutaminase activity IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042816 vitamin B6 metabolic process IEP HCCA
BP GO:0042819 vitamin B6 biosynthetic process IEP HCCA
BP GO:0042822 pyridoxal phosphate metabolic process IEP HCCA
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046184 aldehyde biosynthetic process IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 226 271
IPR002885 Pentatricopeptide_repeat 343 389
IPR002885 Pentatricopeptide_repeat 125 171
IPR002885 Pentatricopeptide_repeat 481 507
IPR002885 Pentatricopeptide_repeat 447 472
IPR046848 E_motif 561 609
No external refs found!