Solyc10g017530.3.1 (Solyc10g017530.3)

Aliases : Solyc10g017530.3

Description : 28.1 DNA.synthesis/chromatin structure RNAhelicase-like 8 (RH8)

Gene families : OG_01_0003297 (Gene family) Phylogenetic Tree(s): OG0003297_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): Solyc10g017530.3.1
Cluster	HCCA cluster: Cluster_285

Target	Alias	Description	ECC score	Gene Family Method
AT3G61240	No alias	DEA(D/H)-box RNA helicase family protein	0.03	Gene family
Cpa\|evm.model.tig00001086.7	No alias	28.1 DNA.synthesis/chromatin structure RNAhelicase-like 8 (RH8)	0.01	Gene family
GSVIVT01019787001	No alias	28.1 DNA.synthesis/chromatin structure RNAhelicase-like 8 (RH8)	0.02	Gene family
Zm00001d013910	GRMZM2G086116	28.1 DNA.synthesis/chromatin structure RNAhelicase-like 8 (RH8)	0.04	Gene family
Zm00001d032526	GRMZM2G129007,...	28.1 DNA.synthesis/chromatin structure RNAhelicase-like 8 (RH8)	0.05	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	142	306
IPR001650	Helicase_C	342	449

External Links

No external refs found!