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  5. Sacu_v1.1_s0194.g025417

Sacu_v1.1_s0194.g025417 (ATHRS1, HRS1)


Aliases : ATHRS1, HRS1

Description : histidine-tRNA ligase & original description: CDS=80-1690


Gene families : OG0005510 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005510_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0194.g025417

Target Alias Description ECC score Gene Family Method Actions
Adi_g076568 ATHRS1, HRS1 histidine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04860 ATHRS1, HRS1 histidine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03283 ATHRS1, HRS1 histidine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G065200.1 ATHRS1, HRS1,... histidine-tRNA ligase & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g24921 ATHRS1, HRS1 histidine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025735001 ATHRS1, HRS1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 OrthoFinder output from all 47 species
LOC_Os02g51830.1 ATHRS1, HRS1,... histidine-tRNA ligase 0.07 OrthoFinder output from all 47 species
Len_g29393 ATHRS1, HRS1 histidine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g14195 ATHRS1, HRS1 histidine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29358 ATHRS1, HRS1 histidine-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g119280.3.1 ATHRS1, HRS1,... histidine-tRNA ligase 0.03 OrthoFinder output from all 47 species
Spa_g06700 ATHRS1, HRS1 histidine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016663_P001 ATHRS1, HRS1,... histidine-tRNA ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008987 quinolinate synthetase A activity IEP HCCA
BP GO:0009435 NAD biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019674 NAD metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR041715 HisRS-like_core 108 420
IPR004154 Anticodon-bd 444 533
No external refs found!