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  5. Sacu_v1.1_s0192.g025323

Sacu_v1.1_s0192.g025323


Description : not classified & original description: CDS=1-897


Gene families : OG0000562 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000562_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0192.g025323

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00046930 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Aop_g30788 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14784 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15840 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g43700.1 LOC_Os06g43700 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
Len_g20544 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g052300.4.1 Solyc05g052300 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0045273 respiratory chain complex II IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!