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  5. Sacu_v1.1_s0184.g024985

Sacu_v1.1_s0184.g024985 (CRF3)


Aliases : CRF3

Description : subgroup ERF-VI transcription factor & original description: CDS=1-1251


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0184.g024985

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00141520 CBF4, DREB1D,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
AT4G18450 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g034904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059856 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21334 tny subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ala_g12877 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13579 PUCHI subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g25437 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g33290 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g36093 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aop_g33217 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04813.t1 DEAR1, CEJ1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05372.t1 DEAR3, Aspi01Gene05372 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05660.t1 Aspi01Gene05660 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene05662.t1 Aspi01Gene05662 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene08042.t1 DREB2A, DREB2,... subgroup ERF-IV/DREB2 transcription factor & original... 0.08 OrthoFinder output from all 47 species
Aspi01Gene15309.t1 ERF72, EBP,... transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aspi01Gene18475.t1 Aspi01Gene18475 subgroup ERF-V transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene21143.t1 ATERF4, RAP2.5,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25515.t1 DEAR1, CEJ1,... subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene25575.t1 DEAR1, CEJ1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28740.t1 SHN3, Aspi01Gene28740 subgroup ERF-V transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene39110.t1 TINY2, Aspi01Gene39110 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene43376.t1 DREB26, Aspi01Gene43376 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene43377.t1 DREB26, Aspi01Gene43377 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene48784.t1 Aspi01Gene48784 cutin and suberin biosynthesis transcription factor... 0.04 OrthoFinder output from all 47 species
Aspi01Gene56619.t1 RAP2.1, Aspi01Gene56619 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61713.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene62044.t2 CRF3, Aspi01Gene62044 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63662.t1 HRE2, Aspi01Gene63662 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene65353.t1 Aspi01Gene65353 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70904.t1 Aspi01Gene70904 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0073.g037137 No alias subgroup ERF-VI transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.01G083900.1 RAP2.2, Ceric.01G083900 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ceric.15G043500.1 HRE2, Ceric.15G043500 transcription factor component *(HRE/RAP2.12) of... 0.07 OrthoFinder output from all 47 species
Ceric.16G004300.1 Ceric.16G004300 not classified & original description: pacid=50588919... 0.05 OrthoFinder output from all 47 species
Cre16.g649433 RAP2.2 No description available 0.03 OrthoFinder output from all 47 species
Dac_g14470 ERF110 subgroup ERF-X transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14879 ERF110 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19647 DREB26 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g21287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23065 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25852 RAP2.1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36841 No alias subgroup ERF-V transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08328 LEP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g19756 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g25479 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g31465 No alias subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01023 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g10951 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ehy_g11677 No alias subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11833 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ehy_g12089 RAP2.12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14116 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15810 HRE2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014291001 ATERF4, RAP2.5,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01022076001 DEAR3 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01025461001 RAP2.11 External stimuli response.biotic... 0.05 OrthoFinder output from all 47 species
Gb_12965 ERF110 Ethylene-responsive transcription factor ABR1... 0.02 OrthoFinder output from all 47 species
Gb_24326 TINY2 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_26739 DREB26 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_29263 DREB26 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Gb_36622 DREB26 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os01g46870.1 CRF1, LOC_Os01g46870 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os04g32620.1 Rap2.6L, LOC_Os04g32620 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
LOC_Os05g28350.1 ABI4, SAN5,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g41780.1 ATERF-9, ERF9,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os06g09790.1 ORA47, LOC_Os06g09790 Ethylene-responsive transcription factor ERF018... 0.04 OrthoFinder output from all 47 species
LOC_Os06g09810.1 LOC_Os06g09810 Ethylene-responsive transcription factor ERF017... 0.03 OrthoFinder output from all 47 species
LOC_Os06g36000.1 TINY2, LOC_Os06g36000 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os09g11460.1 HRE1, LOC_Os09g11460 Ethylene-responsive transcription factor ERF073... 0.04 OrthoFinder output from all 47 species
LOC_Os10g25170.1 RAP2.2, LOC_Os10g25170 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g15213 WIN1, SHN1 subgroup ERF-V transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Len_g15998 CRF4 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03871 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Lfl_g34326 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_502153g0010 ATERF-9, ERF9, ATERF9 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
MA_904750g0010 No alias transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Mp7g00860.1 ABI4, SAN5,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Msp_g04749 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.06 OrthoFinder output from all 47 species
Nbi_g24059 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g03908 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g03958 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g15422 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g28443 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28444 ATERF12, ERF12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10313 No alias subgroup ERF-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g28144 DDF1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g47937 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g05879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18571 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pnu_g20605 Rap2.6L subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c5_11150V3.1 Pp3c5_11150 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g02893 CRF4 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12543 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g22071 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g32689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63803 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002116 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc03g007460.3.1 CRF4, Solyc03g007460 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Tin_g00486 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e010609_P001 RAP2.11, Zm00001e010609 transcription factor (ERF). transcription factor (ERN1) 0.05 OrthoFinder output from all 47 species
Zm00001e013927_P001 ATERF3, ERF3,... transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Zm00001e014413_P001 Zm00001e014413 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e019567_P001 ATERF4, RAP2.5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e025064_P001 ATERF3, ERF3,... transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Zm00001e028920_P001 ATERF4, RAP2.5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e038525_P001 DREB26, Zm00001e038525 Ethylene-responsive transcription factor ERF013... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 82 132
No external refs found!