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  5. Sacu_v1.1_s0184.g024970

Sacu_v1.1_s0184.g024970 (ATMAMI, MAMI)


Aliases : ATMAMI, MAMI

Description : contact site modulator (VST) of ER-cytoskeleton-plasmamembrane interface & original description: CDS=108-761


Gene families : OG0000767 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000767_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0184.g024970

Target Alias Description ECC score Gene Family Method Actions
Ala_g27128 ATMAMI, MAMI contact site modulator (VST) of... 0.03 OrthoFinder output from all 47 species
Aop_g30498 ATMAMI, MAMI contact site modulator (VST) of... 0.03 OrthoFinder output from all 47 species
Cba_g10742 ATMAMI, MAMI contact site modulator (VST) of... 0.02 OrthoFinder output from all 47 species
Dcu_g29063 ATMAMI, MAMI contact site modulator (VST) of... 0.03 OrthoFinder output from all 47 species
Dde_g39351 ATMAMI, MAMI contact site modulator (VST) of... 0.02 OrthoFinder output from all 47 species
Ehy_g25393 ATMAMI, MAMI contact site modulator (VST) of... 0.02 OrthoFinder output from all 47 species
Msp_g44243 ATMAMI, MAMI contact site modulator (VST) of... 0.03 OrthoFinder output from all 47 species
Nbi_g04032 ATMAMI, MAMI contact site modulator (VST) of... 0.04 OrthoFinder output from all 47 species
Pir_g11174 ATMAMI, MAMI contact site modulator (VST) of... 0.02 OrthoFinder output from all 47 species
Pir_g15807 ATMAMI, MAMI contact site modulator (VST) of... 0.03 OrthoFinder output from all 47 species
Ppi_g04300 ATMAMI, MAMI contact site modulator (VST) of... 0.02 OrthoFinder output from all 47 species
Solyc07g054740.3.1 ATMAMI, MAMI,... Vesicle-associated protein 4-2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g38503 ATMAMI, MAMI contact site modulator (VST) of... 0.03 OrthoFinder output from all 47 species
Tin_g04440 No alias contact site modulator (VST) of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016073 snRNA metabolic process IEP HCCA
BP GO:0016180 snRNA processing IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034472 snRNA 3'-end processing IEP HCCA
BP GO:0034477 U6 snRNA 3'-end processing IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000535 MSP_dom 42 144
No external refs found!