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  5. Sacu_v1.1_s0183.g024919

Sacu_v1.1_s0183.g024919 (ATSBT5.4, SBT5.4)


Aliases : ATSBT5.4, SBT5.4

Description : not classified & original description: CDS=160-2451


Gene families : OG0000027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0183.g024919

Target Alias Description ECC score Gene Family Method Actions
Aev_g36429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18393 ARA12 protease *(SBT1) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28210 XSP1 protease *(SBT4) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08790 AIR3 protease *(SBT5) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010119 No alias protease *(SBT2) & original description: CDS=125-1141 0.04 OrthoFinder output from all 47 species
Cba_g16399 No alias protease *(SBT2) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037948001 No alias Protein degradation.peptidase families.serine-type... 0.04 OrthoFinder output from all 47 species
Pir_g18835 SLP3 protease *(SBT2) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26257 ATSBT5.4, SBT5.4 protease *(SBT5) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g030120.3.1 Solyc02g030120 Subtilisin-like protease SBT2.1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc06g062950.1.1 Solyc06g062950 protease (SBT1) 0.05 OrthoFinder output from all 47 species
Zm00001e004853_P002 Zm00001e004853 protease (SBT1) 0.02 OrthoFinder output from all 47 species
Zm00001e010225_P003 Zm00001e010225 protease (SBT3) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008236 serine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR010259 S8pro/Inhibitor_I9 30 110
IPR041469 Subtilisin-like_FN3 666 760
IPR000209 Peptidase_S8/S53_dom 211 584
No external refs found!