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  5. Sacu_v1.1_s0182.g024904

Sacu_v1.1_s0182.g024904


Description : not classified & original description: CDS=185-649


Gene families : OG0002086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0182.g024904
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Als_g42110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036048001 No alias No description available 0.02 OrthoFinder output from all 47 species
Msp_g07336 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g27039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004970 ionotropic glutamate receptor activity IEP HCCA
MF GO:0005230 extracellular ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
MF GO:0008066 glutamate receptor activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0022824 transmitter-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022835 transmitter-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030594 neurotransmitter receptor activity IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
InterPro domains Description Start Stop
IPR003172 ML_dom 24 143
No external refs found!