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  5. Sacu_v1.1_s0182.g024901

Sacu_v1.1_s0182.g024901


Description : not classified & original description: CDS=1-489


Gene families : OG0002601 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002601_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0182.g024901
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Aop_g16271 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene19739.t1 Aspi01Gene19739 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007954 No alias not classified & original description: CDS=1-546 0.03 OrthoFinder output from all 47 species
Ceric.11G023200.1 Ceric.11G023200 not classified & original description: pacid=50594818... 0.03 OrthoFinder output from all 47 species
Ceric.11G024300.1 Ceric.11G024300 not classified & original description: pacid=50596592... 0.03 OrthoFinder output from all 47 species
Dac_g40552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14271 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g33142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g21062 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016831 carboxy-lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR008729 PA_de_COase 7 158
No external refs found!