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  5. Sacu_v1.1_s0173.g024480

Sacu_v1.1_s0173.g024480


Description : not classified & original description: CDS=1-1200


Gene families : OG0001132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001132_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0173.g024480

Target Alias Description ECC score Gene Family Method Actions
Aev_g02200 No alias VPS23-interacting protein *(SH3P2) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06242 No alias VPS23-interacting protein *(SH3P2) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01036934001 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 OrthoFinder output from all 47 species
LOC_Os03g16000.1 LOC_Os03g16000 SH3 domain-containing protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g32460.1 LOC_Os07g32460 SH3 domain-containing protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR001452 SH3_domain 334 378
No external refs found!