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  5. Sacu_v1.1_s0170.g024365

Sacu_v1.1_s0170.g024365


Description : not classified & original description: CDS=203-1702


Gene families : OG0001308 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001308_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0170.g024365

Target Alias Description ECC score Gene Family Method Actions
Adi_g106873 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60717.t1 Aspi01Gene60717 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G027800.1 Ceric.13G027800 not classified & original description: pacid=50635022... 0.03 OrthoFinder output from all 47 species
Dac_g00883 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01031385001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g63880.1 LOC_Os01g63880 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g17500.1 LOC_Os03g17500 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023187 No alias not classified & original description: CDS=659-2785 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!