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  5. Sacu_v1.1_s0168.g024259

Sacu_v1.1_s0168.g024259


Description : large subunit gamma of AP-1 trans-Golgi network cargo adaptor complex & original description: CDS=283-2916


Gene families : OG0002603 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002603_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0168.g024259
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Aev_g07309 GAMMA-ADAPTIN 1,... large subunit gamma of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Cre16.g676650 GAMMA-ADAPTIN 1,... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Dcu_g01942 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
GSVIVT01020209001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
Lfl_g22120 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Nbi_g04417 GAMMA-ADAPTIN 1,... large subunit gamma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003880 protein C-terminal carboxyl O-methyltransferase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004860 protein kinase inhibitor activity IEP HCCA
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006481 C-terminal protein methylation IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0010340 carboxyl-O-methyltransferase activity IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
BP GO:0018410 C-terminal protein amino acid modification IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019210 kinase inhibitor activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0051998 protein carboxyl O-methyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 22 571
IPR008152 Clathrin_a/b/g-adaptin_app_Ig 761 874
No external refs found!