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  5. Sacu_v1.1_s0168.g024257

Sacu_v1.1_s0168.g024257


Description : not classified & original description: CDS=381-929


Gene families : OG0001517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0168.g024257

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00119260 evm_27.TU.AmTr_v1... Cell wall.cutin and suberin.biosynthesis regulation.CFL regulator 0.01 OrthoFinder output from all 47 species
Aev_g47091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0073.g037205 No alias not classified & original description: CDS=1-378 0.04 OrthoFinder output from all 47 species
Ehy_g04400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os11g18940.1 LOC_Os11g18940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7407954g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g11303 No alias regulatory protein *(CFL) of cutin and suberin... 0.03 OrthoFinder output from all 47 species
Sam_g19849 No alias regulatory protein *(CFL) of cutin and suberin... 0.03 OrthoFinder output from all 47 species
Spa_g01714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!