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  5. Sacu_v1.1_s0164.g024075

Sacu_v1.1_s0164.g024075


Description : susceptibility factor *(EXA1) & original description: CDS=1-5616


Gene families : OG0000708 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000708_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0164.g024075
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT1G24300 No alias GYF domain-containing protein 0.07 OrthoFinder output from all 47 species
AT1G27430 No alias GYF domain-containing protein 0.09 OrthoFinder output from all 47 species
Adi_g055823 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g068481 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09024 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37682 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14645 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22450 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17703 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70568 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0013.g013375 No alias not classified & original description: CDS=187-2031 0.05 OrthoFinder output from all 47 species
Azfi_s0448.g070692 No alias susceptibility factor *(EXA1) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.18G008600.1 Ceric.18G008600 susceptibility factor *(EXA1) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.18G048100.1 Ceric.18G048100 susceptibility factor *(EXA1) & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.56 No alias No description available 0.04 OrthoFinder output from all 47 species
Dac_g14782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05846 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39021 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15753 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000921001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01000922001 No alias No description available 0.09 OrthoFinder output from all 47 species
GSVIVT01009695001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01033051001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g69990.1 LOC_Os01g69990 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Len_g14158 No alias susceptibility factor *(EXA1) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g20603 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04295 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07445 No alias susceptibility factor *(EXA1) & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g16227 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10117g0030 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10425836g0010 No alias susceptibility factor (EXA1) 0.04 OrthoFinder output from all 47 species
MA_10425836g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp8g07340.1 No alias susceptibility factor (EXA1) 0.02 OrthoFinder output from all 47 species
Msp_g20541 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44868 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g06775 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g16118 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g54992 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11581 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24517 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo438556 No alias No description available 0.04 OrthoFinder output from all 47 species
Smo438614 No alias No description available 0.07 OrthoFinder output from all 47 species
Solyc05g015920.3.1 Solyc05g015920 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc05g015930.4.1 Solyc05g015930 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g30700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55090 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35687 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028423_P003 Zm00001e028423 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e028424_P001 Zm00001e028424 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e032780_P001 Zm00001e032780 susceptibility factor (EXA1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003169 GYF 555 600
No external refs found!