Description : not classified & original description: CDS=113-2587
Gene families : OG0000677 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000677_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g089100 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g07409 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g28877 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene41710.t1 | Aspi01Gene41710 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g51773 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01022440001 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os07g27110.1 | LOC_Os07g27110 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
MA_169053g0010 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
MA_8142g0020 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g48146 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g05005 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g13061 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g18521 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g38066 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g52292 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g52296 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g15243 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g12919 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e007365_P001 | Zm00001e007365 | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000159 | protein phosphatase type 2A complex | IEP | HCCA |
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
CC | GO:0000786 | nucleosome | IEP | HCCA |
MF | GO:0005507 | copper ion binding | IEP | HCCA |
CC | GO:0005758 | mitochondrial intermembrane space | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0007165 | signal transduction | IEP | HCCA |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
MF | GO:0016530 | metallochaperone activity | IEP | HCCA |
MF | GO:0016531 | copper chaperone activity | IEP | HCCA |
MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
MF | GO:0019786 | Atg8-specific peptidase activity | IEP | HCCA |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | HCCA |
CC | GO:0031970 | organelle envelope lumen | IEP | HCCA |
CC | GO:0031974 | membrane-enclosed lumen | IEP | HCCA |
CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
CC | GO:0043233 | organelle lumen | IEP | HCCA |
CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
CC | GO:0070013 | intracellular organelle lumen | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | HCCA |
MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
CC | GO:1903293 | phosphatase complex | IEP | HCCA |
No external refs found! |