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  5. Sacu_v1.1_s0158.g023802

Sacu_v1.1_s0158.g023802 (AtTLP8, TLP8)


Aliases : AtTLP8, TLP8

Description : TUB-type transcription factor & original description: CDS=382-1587


Gene families : OG0004261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004261_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0158.g023802
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT1G16070 AtTLP8, TLP8 tubby like protein 8 0.03 OrthoFinder output from all 47 species
Als_g03648 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g37430 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene46266.t1 AtTLP8, TLP8,... TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G003600.1 AtTLP8, TLP8,... TUB-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g04627 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g20792 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01016095001 AtTLP8, TLP8 RNA biosynthesis.transcriptional activation.TUB... 0.04 OrthoFinder output from all 47 species
Gb_10186 AtTLP8, TLP8 transcription factor (TUB) 0.04 OrthoFinder output from all 47 species
MA_13250g0010 AtTLP8, TLP8 transcription factor (TUB) 0.04 OrthoFinder output from all 47 species
Msp_g14577 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02347 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g117730.3.1 AtTLP8, TLP8,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Spa_g00453 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g37411 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51600 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14493 AtTLP8, TLP8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31402 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013819_P001 AtTLP8, TLP8,... transcription factor (TUB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR000007 Tubby_C 156 395
No external refs found!