Sacu_v1.1_s0158.g023787

Description : histone demethylase *(PKDM12) & original description: CDS=61-1758

Gene families : OG0005032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005032_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0158.g023787
Cluster	HCCA: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method	Actions
Adi_g025706	No alias	histone demethylase *(PKDM12) & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g11583	No alias	histone demethylase *(PKDM12) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
MF	GO:0000062	fatty-acyl-CoA binding	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0003917	DNA topoisomerase type I (single strand cut, ATP-independent) activity	IEP	HCCA
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006826	iron ion transport	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
BP	GO:0034755	iron ion transmembrane transport	IEP	HCCA
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
MF	GO:0120227	acyl-CoA binding	IEP	HCCA
MF	GO:1901567	fatty acid derivative binding	IEP	HCCA
MF	GO:1901681	sulfur compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041667	Cupin_8	37	303

External Links

No external refs found!