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  5. Sacu_v1.1_s0156.g023635

Sacu_v1.1_s0156.g023635 (EBS)


Aliases : EBS

Description : component *(SHL/EBS) of PRC1 complex & original description: CDS=340-915


Gene families : OG0000671 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000671_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0156.g023635

Target Alias Description ECC score Gene Family Method Actions
Als_g07032 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.03 OrthoFinder output from all 47 species
Cre16.g675246 EBS Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Solyc07g049210.3.1 EBS, Solyc07g049210 component BAH of BAH-EMF1 Polycomb silencing complex 0.03 OrthoFinder output from all 47 species
Zm00001e033007_P001 EBS, Zm00001e033007 component BAH of BAH-EMF1 Polycomb silencing complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR001025 BAH_dom 23 136
IPR019787 Znf_PHD-finger 140 188
No external refs found!