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  5. Sacu_v1.1_s0154.g023543

Sacu_v1.1_s0154.g023543 (NTMC2T3, SYTF,...)


Aliases : NTMC2T3, SYTF, NTMC2TYPE3, ATSYTF

Description : not classified & original description: CDS=193-2574


Gene families : OG0002262 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002262_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0154.g023543

Target Alias Description ECC score Gene Family Method Actions
Als_g02577 NTMC2T3, SYTF,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021726.12 No alias Synaptotagmin-5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Lfl_g31358 NTMC2T3, SYTF,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06826 NTMC2T3, SYTF,... not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0004057 arginyltransferase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006906 vesicle fusion IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
BP GO:0016050 vesicle organization IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0016598 protein arginylation IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0048280 vesicle fusion with Golgi apparatus IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0061025 membrane fusion IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0090174 organelle membrane fusion IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 290 365
IPR000008 C2_dom 593 690
IPR000008 C2_dom 463 560
No external refs found!