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  5. Sacu_v1.1_s0152.g023466

Sacu_v1.1_s0152.g023466


Description : not classified & original description: CDS=429-1313


Gene families : OG0007062 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007062_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0152.g023466
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Dcu_g02823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g17450.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g44671 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g068680.2.1 Solyc11g068680 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e038285_P001 Zm00001e038285 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!