Sacu_v1.1_s0148.g023216 (XPO1A, HIT2, ATCRM1,...)

Aliases : XPO1A, HIT2, ATCRM1, XPO1, ATXPO1

Description : nucleocytoplasmic export karyopherin *(XPO1) & original description: CDS=331-3546

Gene families : OG0003383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003383_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0148.g023216

Target	Alias	Description	ECC score	Gene Family Method
Adi_g018503	XPO1A, HIT2,...	nucleocytoplasmic export karyopherin *(XPO1) & original...	0.03	OrthoFinder output from all 47 species
Aob_g14359	XPO1A, HIT2,...	nucleocytoplasmic export karyopherin *(XPO1) & original...	0.03	OrthoFinder output from all 47 species
Ore_g25272	XPO1A, HIT2,...	nucleocytoplasmic export karyopherin *(XPO1) & original...	0.03	OrthoFinder output from all 47 species
Sam_g40475	No alias	nucleocytoplasmic export karyopherin *(XPO1) & original...	0.03	OrthoFinder output from all 47 species
Zm00001e006430_P001	XPO1A, HIT2,...	XPO1 nucleocytoplasmic export karyopherin	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005049	nuclear export signal receptor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0031267	small GTPase binding	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
MF	GO:0051020	GTPase binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
MF	GO:0140104	molecular carrier activity	None	Extended
MF	GO:0140142	nucleocytoplasmic carrier activity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0002097	tRNA wobble base modification	IEP	HCCA
BP	GO:0002098	tRNA wobble uridine modification	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006400	tRNA modification	IEP	HCCA
BP	GO:0006650	glycerophospholipid metabolic process	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	HCCA
CC	GO:0033588	elongator holoenzyme complex	IEP	HCCA
BP	GO:0046486	glycerolipid metabolic process	IEP	HCCA
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041123	CRM1_repeat	336	371
IPR041235	Exp1_repeat_2	404	471
IPR001494	Importin-beta_N	36	102
IPR040485	XPO1_repeat_3	485	534
IPR014877	XPO1_C_dom	708	1028
IPR013598	Exportin-1/Importin-b-like	114	257

External Links

No external refs found!