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  5. Sacu_v1.1_s0146.g023042

Sacu_v1.1_s0146.g023042


Description : not classified & original description: CDS=1-1011


Gene families : OG0001064 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001064_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0146.g023042
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Cba_g04475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24403 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g17539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g19780.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Sam_g10908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19664 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR019080 YqaJ_viral_recombinase 98 240
No external refs found!