Solyc10g008570.3.1 (Solyc10g008570.3)


Aliases : Solyc10g008570.3

Description : No description available


Gene families : OG_01_0000325 (Gene family) Phylogenetic Tree(s): OG0000325_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc10g008570.3.1
Cluster HCCA cluster: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT1G11250 SYP125, ATSYP125 syntaxin of plants 125 0.05 Gene family
GSVIVT01006716001 No alias 31.4 cell.vesicle transport member of SYP12 Gene Family... 0.03 Gene family
GSVIVT01030578001 No alias 31.4 cell.vesicle transport member of SYP12 Gene Family... 0.02 Gene family
LOC_Os06g07200 Os06g0168500 31.4 cell.vesicle transport member of SYP13 Gene Family... 0.02 Gene family
Smo151097 PACid_15414040 31.4 cell.vesicle transport member of SYP12 Gene Family... 0.03 Gene family
Solyc10g081580.2.1 Solyc10g081580.2 31.4 cell.vesicle transport member of SYP13 Gene Family... 0.03 Gene family
Zm00001d036931 GRMZM2G416733 31.4 cell.vesicle transport member of SYP12 Gene Family... 0.02 Gene family
Zm00001d046482 GRMZM2G095441 31.4 cell.vesicle transport member of SYP12 Gene Family... 0.02 Gene family

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 248 296
IPR002885 Pentatricopeptide_repeat 600 626
IPR002885 Pentatricopeptide_repeat 768 789
IPR002885 Pentatricopeptide_repeat 496 521
IPR002885 Pentatricopeptide_repeat 422 470
IPR002885 Pentatricopeptide_repeat 694 740
IPR002885 Pentatricopeptide_repeat 523 571
IPR006011 Syntaxin_N 41 246
No external refs found!