Sacu_v1.1_s0138.g022588 (ERD2B)

Aliases : ERD2B

Description : COPI trafficking K/HDEL-signature cargo receptor & original description: CDS=181-810

Gene families : OG0002105 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002105_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0138.g022588
Cluster	HCCA: Cluster_35

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00228p00021360	ERD2B,...	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.02	OrthoFinder output from all 47 species
Adi_g021439	ERD2B	COPI trafficking K/HDEL-signature cargo receptor &...	0.02	OrthoFinder output from all 47 species
Cre01.g051400	ERD2B	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.02	OrthoFinder output from all 47 species
Dac_g01978	ERD2B	COPI trafficking K/HDEL-signature cargo receptor &...	0.06	OrthoFinder output from all 47 species
Ehy_g03485	No alias	COPI trafficking K/HDEL-signature cargo receptor &...	0.03	OrthoFinder output from all 47 species
Ehy_g05451	ERD2B	COPI trafficking K/HDEL-signature cargo receptor &...	0.05	OrthoFinder output from all 47 species
LOC_Os11g28340.1	ERD2B, LOC_Os11g28340	ERD2 COPI trafficking K/HDEL-signature receptor	0.02	OrthoFinder output from all 47 species
Ppi_g05082	ERD2B	COPI trafficking K/HDEL-signature cargo receptor &...	0.03	OrthoFinder output from all 47 species
Smo75833	ERD2B	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.04	OrthoFinder output from all 47 species
Zm00001e032183_P001	ERD2, ATERD2,...	ERD2 COPI trafficking K/HDEL-signature receptor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005048	signal sequence binding	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006621	protein retention in ER lumen	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0032507	maintenance of protein location in cell	None	Extended
MF	GO:0033218	amide binding	None	Extended
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	None	Extended
MF	GO:0042277	peptide binding	None	Extended
BP	GO:0045185	maintenance of protein location	None	Extended
MF	GO:0046923	ER retention sequence binding	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051235	maintenance of location	None	Extended
BP	GO:0051651	maintenance of location in cell	None	Extended
BP	GO:0072595	maintenance of protein localization in organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006400	tRNA modification	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
BP	GO:0034227	tRNA thio-modification	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
MF	GO:0051920	peroxiredoxin activity	IEP	HCCA
MF	GO:0070001	aspartic-type peptidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000133	ER_ret_rcpt	88	231

External Links

No external refs found!