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  5. Ehy_g07308

Ehy_g07308 (ATRABG3C, ATRAB7D, RABG3c)


Aliases : ATRABG3C, ATRAB7D, RABG3c

Description : G-class RAB GTPase & original description: none


Gene families : OG0000865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000865_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g07308

Target Alias Description ECC score Gene Family Method Actions
AT1G52280 AtRABG3d, RABG3d RAB GTPase homolog G3D 0.02 OrthoFinder output from all 47 species
AT3G18820 ATRAB7B, RAB7B,... RAB GTPase homolog G3F 0.06 OrthoFinder output from all 47 species
Adi_g115862 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12075 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g01066 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0307.g063993 AtRABG3d, RABG3d G-class RAB GTPase & original description: CDS=107-727 0.04 OrthoFinder output from all 47 species
LOC_Os05g44050.1 ATRAB7B, RAB7B,... G-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Lfl_g08054 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10043564g0010 AtRABG3d, RABG3d G-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Mp8g13820.1 AtRABG3d, RABG3d G-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Msp_g12466 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00853 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12050 ATRABG3B,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011168 ATRABG3C, ATRAB7D, RABG3c G-class RAB GTPase & original description: CDS=38-799 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0287.g027148 ATRABG3C, ATRAB7D, RABG3c G-class RAB GTPase & original description: CDS=209-802 0.02 OrthoFinder output from all 47 species
Solyc01g109520.3.1 ATRAB7B, RAB7B,... G-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Solyc03g120750.3.1 AtRABG3d,... G-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Spa_g12567 ATRABG3C, ATRAB7D, RABG3c G-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e032146_P002 ATRAB7B, RAB7B,... G-class RAB GTPase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 10 177
No external refs found!