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  5. Sacu_v1.1_s0133.g022259

Sacu_v1.1_s0133.g022259


Description : small subunit sigma of AP-2 cargo adaptor complex & original description: CDS=1-501


Gene families : OG0006811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0133.g022259

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00057620 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
AMTR_s00391p00008660 evm_27.TU.AmTr_v1... AP-2 complex subunit sigma OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aop_g41486 No alias small subunit sigma of AP-2 cargo adaptor complex &... 0.08 OrthoFinder output from all 47 species
Azfi_s0024.g020463 No alias not classified & original description: CDS=110-682 0.03 OrthoFinder output from all 47 species
Ceric.12G036900.1 Ceric.12G036900 small subunit sigma of AP-2 cargo adaptor complex &... 0.03 OrthoFinder output from all 47 species
Cre07.g324600 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Dac_g01162 No alias small subunit sigma of AP-2 cargo adaptor complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g11522 No alias small subunit sigma of AP-2 cargo adaptor complex &... 0.03 OrthoFinder output from all 47 species
LOC_Os12g10560.1 LOC_Os12g10560 small subunit sigma of AP-2 cargo adaptor complex 0.04 OrthoFinder output from all 47 species
Mp1g19570.1 No alias small subunit sigma of AP-2 cargo adaptor complex 0.02 OrthoFinder output from all 47 species
Ppi_g01569 No alias small subunit sigma of AP-2 cargo adaptor complex &... 0.03 OrthoFinder output from all 47 species
Solyc04g081410.3.1 Solyc04g081410 small subunit sigma of AP-2 cargo adaptor complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006848 pyruvate transport IEP HCCA
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015718 monocarboxylic acid transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
BP GO:1901475 pyruvate transmembrane transport IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 26 165
No external refs found!