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  5. Sacu_v1.1_s0132.g022136

Sacu_v1.1_s0132.g022136


Description : not classified & original description: CDS=1-1032


Gene families : OG0000810 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000810_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0132.g022136
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Als_g38435 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g38963 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g64197 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.39G030400.1 Ceric.39G030400 not classified & original description: pacid=50583250... 0.04 OrthoFinder output from all 47 species
Nbi_g39669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50158 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005524_P002 Zm00001e005524 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008198 ferrous iron binding IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 167 315
IPR011074 CRAL/TRIO_N_dom 117 142
No external refs found!