Sacu_v1.1_s0130.g022057 (HSP93-V, DCA1,...)

Aliases : HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1

Description : chaperone component *(ClpC) of chloroplast Clp-type protease complex & original description: CDS=1-2817

Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0130.g022057

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00086p00119290	ATHSP101, HOT1,...	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
Ala_g06018	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g38166	SAG15, CLPD, ERD1	chaperone component *(ClpD) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Aob_g42026	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene10809.t1	SAG15, CLPD,...	chaperone component *(ClpD) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Cba_g05307	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g20352	HSP93-V, DCA1,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Cre02.g090850	CLPB3, CLPB-P, APG6	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
Cre11.g467644	ATHSP101, HOT1, HSP101	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
LOC_Os02g32520.1	SAG15, CLPD,...	chaperone component ClpD of chloroplast Clp-type protease complex	0.03	OrthoFinder output from all 47 species
Len_g29759	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.04	OrthoFinder output from all 47 species
Len_g34142	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.01	OrthoFinder output from all 47 species
MA_214624g0010	ATHSP101, HOT1, HSP101	Chaperone protein ClpB1 OS=Oryza sativa subsp. japonica...	0.01	OrthoFinder output from all 47 species
Msp_g48913	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g12284	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Pir_g05832	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g23962	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c19_4790V3.1	ATHSP101, HOT1,...	heat shock protein 101	0.01	OrthoFinder output from all 47 species
Ppi_g10767	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g17937	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g40577	HSP93-V, DCA1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g03515	HSP93-V, DCA1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e032223_P001	ATHSP101, HOT1,...	cytosolic chaperone (Hsp101)	0.02	OrthoFinder output from all 47 species
Zm00001e038056_P001	CLPB3, CLPB-P,...	organellar chaperone (Clp-p\|Clp-m)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
BP	GO:0051259	protein complex oligomerization	IEP	HCCA
BP	GO:0051260	protein homooligomerization	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041546	ClpA/ClpB_AAA_lid	435	536
IPR003959	ATPase_AAA_core	635	810
IPR019489	Clp_ATPase_C	816	895
IPR004176	Clp_R_dom	106	158
IPR004176	Clp_R_dom	182	233
IPR003959	ATPase_AAA_core	297	426

External Links

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Sacu_v1.1_s0130.g022057 (HSP93-V, DCA1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation