Description : pre-mRNA splicing factor *(SF1) & original description: CDS=179-2428
Gene families : OG0000568 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000568_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00078p00155240 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.U2-type-intron-specific... | 0.03 | OrthoFinder output from all 47 species | |
Als_g14038 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g15565 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g52145 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g18171 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g01316 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g73082 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g16716 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g04920 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Mp7g15050.1 | No alias | pre-mRNA splicing factor (SF1) | 0.02 | OrthoFinder output from all 47 species | |
Pir_g60982 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA | IEP | HCCA |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
MF | GO:0003729 | mRNA binding | IEP | HCCA |
CC | GO:0005643 | nuclear pore | IEP | HCCA |
CC | GO:0005685 | U1 snRNP | IEP | HCCA |
BP | GO:0006376 | mRNA splice site selection | IEP | HCCA |
BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
MF | GO:0008047 | enzyme activator activity | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | HCCA |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
BP | GO:0043085 | positive regulation of catalytic activity | IEP | HCCA |
BP | GO:0044093 | positive regulation of molecular function | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0050790 | regulation of catalytic activity | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0065009 | regulation of molecular function | IEP | HCCA |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
BP | GO:0110154 | RNA decapping | IEP | HCCA |
BP | GO:0110156 | methylguanosine-cap decapping | IEP | HCCA |
CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |