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  5. Sacu_v1.1_s0126.g021772

Sacu_v1.1_s0126.g021772


Description : microtubule assembly factor *(TCS1) & original description: CDS=818-3022


Gene families : OG0000207 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0126.g021772

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00158230 evm_27.TU.AmTr_v1... Vesicle trafficking.target membrane tethering.VETH... 0.03 OrthoFinder output from all 47 species
Aspi01Gene01374.t1 Aspi01Gene01374 microtubule assembly factor *(TCS1) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene50098.t1 Aspi01Gene50098 microtubule assembly factor *(TCS1) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g11615 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.26G013900.1 Ceric.26G013900 microtubule assembly factor *(TCS1) & original... 0.02 OrthoFinder output from all 47 species
Dac_g21457 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26435 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13597 No alias recruiting factor *(VETH) of Exocyst complex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01009871001 No alias Filament-like plant protein 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01022085001 No alias Vesicle trafficking.target membrane tethering.VETH... 0.03 OrthoFinder output from all 47 species
Len_g14363 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g20920.1 No alias Exocyst complex recruiting factor (VETH) 0.03 OrthoFinder output from all 47 species
Msp_g14167 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15091 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g34361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g37129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19285 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02317 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g30481 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g40048 No alias recruiting factor *(VETH) of Exocyst complex & original... 0.02 OrthoFinder output from all 47 species
Pir_g40603 No alias microtubule assembly factor *(TCS1) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g16217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19427 No alias microtubule assembly factor *(TCS1) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g30407 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36499 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo104884 No alias Filament-like plant protein 6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Spa_g25993 No alias recruiting factor *(VETH) of Exocyst complex & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008587 FPP_plant 79 503
No external refs found!