Sacu_v1.1_s0126.g021751


Description : not classified & original description: CDS=344-4516


Gene families : OG0000214 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000214_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0126.g021751
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AT5G45720 No alias AAA-type ATPase family protein 0.01 OrthoFinder output from all 47 species
Adi_g011687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12565 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17547 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13755.t1 STI, Aspi01Gene13755 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35944.t2 STI, Aspi01Gene35944 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53747.t1 Aspi01Gene53747 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0037.g025896 No alias not classified & original description: CDS=287-3238 0.04 OrthoFinder output from all 47 species
Cba_g12073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14646 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g22371 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34595 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G078500.1 STI, Ceric.09G078500 not classified & original description: pacid=50587415... 0.02 OrthoFinder output from all 47 species
Ceric.14G036000.1 STI, Ceric.14G036000 not classified & original description: pacid=50633102... 0.03 OrthoFinder output from all 47 species
Dcu_g12337 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19715 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46156 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_40531 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g22546 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05036 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30222 STI not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10318746g0010 STI Protein STICHEL OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_117307g0010 STI Protein STICHEL OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_34437g0010 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g02122 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14718 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32517 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13683 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27279 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58662 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33305 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59639 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61848 STI not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016765 STI not classified & original description: CDS=1-3897 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s3431.g028773 No alias not classified & original description: CDS=1-498 0.03 OrthoFinder output from all 47 species
Tin_g24966 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!